genomes: 4555
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4555 | Setaria italica | Poaceae | Poales | Streptophyta | GCF_000263155.2 | 331 | 129893 | 0.2541774173731416 | 99.6 | ["u11", "u12", "u6atac"] | Setaria_italica_v2.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/155/GCF_000263155.2_Setaria_italica_v2.0 | GCF_000263155.2;PRJNA207554;SAMN02981383;AGNK00000000.2;representative genome;4555;4555;Setaria italica;strain=Yugu1;;latest;Chromosome;Major;Full;2015/10/30;Setaria_italica_v2.0;JGI-PGF;GCA_000263155.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/155/GCF_000263155.2_Setaria_italica_v2.0;;;na | 1 |
Links from other tables
- 130,224 rows from taxonomy_id in introns
- 27,505 rows from taxonomy_id in transcripts