genomes: 3694
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3694 | Populus trichocarpa | Salicaceae | Malpighiales | Streptophyta | GCF_000002775.4 | 402 | 161954 | 0.2476040306486979 | 99.6 | ["u11", "u12", "u6atac"] | Pop_tri_v3 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/775/GCF_000002775.4_Pop_tri_v3 | GCF_000002775.4;PRJNA17973;SAMN02953657;AARH00000000.3;representative genome;3694;3694;Populus trichocarpa;;Nisqually-1;latest;Chromosome;Major;Full;2018/01/24;Pop_tri_v3;US DOE Joint Genome Institute (JGI;GCA_000002775.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/775/GCF_000002775.4_Pop_tri_v3;;;na | 1 |
Links from other tables
- 162,356 rows from taxonomy_id in introns
- 31,641 rows from taxonomy_id in transcripts