genomes: 13443
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13443 | Coffea arabica | Rubiaceae | Gentianales | Streptophyta | GCF_003713225.1 | 513 | 212287 | 0.2410714285714285 | 98.8 | ["u11", "u12", "u6atac"] | Cara_1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/713/225/GCF_003713225.1_Cara_1.0 | GCF_003713225.1;PRJNA506972;SAMN10272287;RHJU00000000.1;representative genome;13443;13443;Coffea arabica;cultivar=Caturra red;CCC135-36;latest;Chromosome;Major;Full;2018/11/08;Cara_1.0;Johns Hopkins University;GCA_003713225.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/713/225/GCF_003713225.1_Cara_1.0;;;na | 1 |
Links from other tables
- 212,800 rows from taxonomy_id in introns
- 44,759 rows from taxonomy_id in transcripts