taxonomy_id,species,family,order,phylum,accession,n_minor_introns,n_major_introns,percent_minor_introns,busco_score,minor_snRNAs,genome_version,source_url,source_metadata,minor_intron+
57397,Apaloderma vittatum,Trogonidae,Trogoniformes,Chordata,GCF_000703405.1,423,113269,0.3720578404813003,55.7,"[""u12"", ""u4atac"", ""u6atac""]",ASM70340v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/703/405/GCF_000703405.1_ASM70340v1,GCF_000703405.1;PRJNA263608;SAMN02318033;JMFV00000000.1;representative genome;57397;57397;Apaloderma vittatum;;BGI_N311;latest;Scaffold;Major;Full;2014/06/16;ASM70340v1;BGI;GCA_000703405.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/703/405/GCF_000703405.1_ASM70340v1;;;na,1
48883,Geospiza fortis,Thraupidae,Passeriformes,Chordata,GCF_000277835.1,525,147101,0.3556284123392898,84.7,"[""u12"", ""u4atac"", ""u6atac""]",GeoFor_1.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/835/GCF_000277835.1_GeoFor_1.0,GCF_000277835.1;PRJNA217051;SAMN00839579;AKZB00000000.1;representative genome;48883;48883;Geospiza fortis;;;latest;Scaffold;Major;Full;2012/07/25;GeoFor_1.0;Beijing Genomics Institute;GCA_000277835.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/835/GCF_000277835.1_GeoFor_1.0;;;na,1
30464,Nothoprocta perdicaria,Tinamidae,Tinamiformes,Chordata,GCF_003342845.1,552,154817,0.3552832289581576,92.9,"[""u12"", ""u4atac"", ""u6atac""]",notPer1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/342/845/GCF_003342845.1_notPer1,GCF_003342845.1;PRJNA484763;SAMN08476459;PTEW00000000.1;representative genome;30464;30464;Nothoprocta perdicaria;;Ctin4;latest;Scaffold;Major;Full;2018/07/26;notPer1;Harvard University;GCA_003342845.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/342/845/GCF_003342845.1_notPer1;;;na,1
8663,Notechis scutatus,Elapidae,Squamata,Chordata,GCF_900518725.1,607,171967,0.3517331695388645,95.3,"[""u12"", ""u4atac"", ""u6atac""]",TS10Xv2-PRI,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/518/725/GCF_900518725.1_TS10Xv2-PRI,GCF_900518725.1;PRJNA494227;SAMEA4800209;ULFQ00000000.1;representative genome;8663;8663;Notechis scutatus;;;latest;Scaffold;Major;Full;2018/09/24;TS10Xv2-PRI;UNIVERSITY OF NEW SOUTH WALES;GCA_900518725.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/518/725/GCF_900518725.1_TS10Xv2-PRI;;;na,1
9244,Calypte anna,Trochilidae,Apodiformes,Chordata,GCF_003957555.1,537,153405,0.3488326772420781,94.9,"[""u12"", ""u4atac"", ""u6atac""]",bCalAnn1_v1.p,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/957/555/GCF_003957555.1_bCalAnn1_v1.p,GCF_003957555.1;PRJNA558503;SAMN02265252;RRCD00000000.1;representative genome;9244;9244;Calypte anna;;BGI_N300;latest;Chromosome;Major;Full;2019/05/16;bCalAnn1_v1.p;Vertebrate Genomes Project;GCA_003957555.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/957/555/GCF_003957555.1_bCalAnn1_v1.p;;;na,1
328815,Manacus vitellinus,Pipridae,Passeriformes,Chordata,GCF_001715985.3,519,149246,0.3465429172370046,87.5,"[""u12"", ""u4atac"", ""u6atac""]",ASM171598v3,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/715/985/GCF_001715985.3_ASM171598v3,GCF_001715985.3;PRJNA341382;SAMN02299332;MCBO00000000.3;representative genome;328815;328815;Manacus vitellinus;;BGI_N305;latest;Scaffold;Major;Full;2019/07/03;ASM171598v3;Smithsonian Institution National Museum of Natural History;GCA_001715985.3;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/715/985/GCF_001715985.3_ASM171598v3;;;na,1
1754191,Piromyces finnis,Neocallimastigaceae,Neocallimastigales,Chytridiomycota,GCA_002104945.1,147,43177,0.3393038500600129,88.2,"[""u12"", ""u4atac"", ""u6atac""]",Piromyces sp. finnis v3.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/945/GCA_002104945.1_Piromyces_sp._finnis_v3.0,GCA_002104945.1;PRJNA330696;SAMN05421903;MCFH00000000.1;representative genome;1754191;1754191;Piromyces finnis;strain=finn;;latest;Contig;Major;Full;2017/04/20;Piromyces sp. finnis v3.0;DOE Joint Genome Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/945/GCA_002104945.1_Piromyces_sp._finnis_v3.0;;assembly from type material;na,1
321398,Lepidothrix coronata,Pipridae,Passeriformes,Chordata,GCF_001604755.1,554,162800,0.3391407617811623,94.9,"[""u12"", ""u4atac"", ""u6atac""]",Lepidothrix_coronata-1.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/604/755/GCF_001604755.1_Lepidothrix_coronata-1.0,GCF_001604755.1;PRJNA338288;SAMN04274560;LVWP00000000.1;representative genome;321398;321398;Lepidothrix coronata;;B3197;latest;Scaffold;Major;Full;2016/03/31;Lepidothrix_coronata-1.0;McDonnell Genome Institute;GCA_001604755.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/604/755/GCF_001604755.1_Lepidothrix_coronata-1.0;;;na,1
8496,Alligator mississippiensis,Alligatoridae,Crocodylia,Chordata,GCF_000281125.3,644,193122,0.3323596502998462,99.6,"[""u12"", ""u4atac"", ""u6atac""]",ASM28112v4,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/125/GCF_000281125.3_ASM28112v4,GCF_000281125.3;PRJNA221578;SAMN02981418;AKHW00000000.3;representative genome;8496;8496;Alligator mississippiensis;;KSC_2009_1;latest;Scaffold;Major;Full;2016/03/28;ASM28112v4;International Crocodilian Genomes Working Group;GCA_000281125.4;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/125/GCF_000281125.3_ASM28112v4;;;na,1
40210,Spizella passerina,Passerellidae,Passeriformes,Chordata,GCA_013401375.1,105,37509,0.2791513798053916,44.7,"[""u12"", ""u4atac"", ""u6atac""]",ASM1340137v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/401/375/GCA_013401375.1_ASM1340137v1,GCA_013401375.1;PRJNA545868;SAMN12253929;WBNQ00000000.1;representative genome;40210;40210;Spizella passerina;;B10K-DU-023-52;latest;Scaffold;Major;Full;2020/07/10;ASM1340137v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/401/375/GCA_013401375.1_ASM1340137v1;;;na,1
1754190,Neocallimastix californiae,Neocallimastigaceae,Neocallimastigales,Chytridiomycota,GCA_002104975.1,183,65380,0.2791208455988896,88.6,"[""u12"", ""u4atac"", ""u6atac""]",Neocallimastix sp. G1 v1.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/975/GCA_002104975.1_Neocallimastix_sp._G1_v1.0,GCA_002104975.1;PRJNA262392;SAMN05428678;MCOG00000000.1;representative genome;1754190;1754190;Neocallimastix californiae;strain=G1;;latest;Contig;Major;Full;2017/04/20;Neocallimastix sp. G1 v1.0;DOE Joint Genome Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/975/GCA_002104975.1_Neocallimastix_sp._G1_v1.0;;assembly from type material;na,1
172689,Lophotis ruficrista,Otididae,Gruiformes,Chordata,GCA_013396455.1,304,108749,0.2787635369957726,86.7,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339645v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/455/GCA_013396455.1_ASM1339645v1,GCA_013396455.1;PRJNA545868;SAMN12253761;VWYV00000000.1;representative genome;172689;172689;Lophotis ruficrista;;B10K-CU-031-23;latest;Scaffold;Major;Full;2020/07/10;ASM1339645v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/455/GCA_013396455.1_ASM1339645v1;;;na,1
114276,Cephalopterus ornatus,Cotingidae,Passeriformes,Chordata,GCA_013396775.1,298,106670,0.2785879889312692,83.9,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339677v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/775/GCA_013396775.1_ASM1339677v1,GCA_013396775.1;PRJNA545868;SAMN12253765;VZRE00000000.1;representative genome;114276;114276;Cephalopterus ornatus;;B10K-DU-001-01;latest;Scaffold;Major;Full;2020/07/10;ASM1339677v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/775/GCA_013396775.1_ASM1339677v1;;;na,1
1961834,Ceuthmochares aereus,Cuculidae,Cuculiformes,Chordata,GCA_013398935.1,245,88218,0.2769519460113268,72.2,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339893v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/935/GCA_013398935.1_ASM1339893v1,GCA_013398935.1;PRJNA545868;SAMN12253749;VWPQ00000000.1;representative genome;1961834;1961834;Ceuthmochares aereus;;B10K-CU-031-02;latest;Scaffold;Major;Full;2020/07/10;ASM1339893v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/935/GCA_013398935.1_ASM1339893v1;;;na,1
425643,Ibidorhyncha struthersii,Charadriidae,Charadriiformes,Chordata,GCA_013398815.1,298,108054,0.2750295333727112,83.9,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339881v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/815/GCA_013398815.1_ASM1339881v1,GCA_013398815.1;PRJNA545868;SAMN12253964;VZSZ00000000.1;representative genome;425643;425643;Ibidorhyncha struthersii;;B10K-DU-030-25;latest;Scaffold;Major;Full;2020/07/10;ASM1339881v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/815/GCA_013398815.1_ASM1339881v1;;;na,1
89386,Ardeotis kori,Otididae,Gruiformes,Chordata,GCA_013396375.1,292,107619,0.270593359342421,82.0,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339637v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/375/GCA_013396375.1_ASM1339637v1,GCA_013396375.1;PRJNA545868;SAMN12253748;VWPR00000000.1;representative genome;89386;89386;Ardeotis kori;;B10K-CU-031-01;latest;Scaffold;Major;Full;2020/07/10;ASM1339637v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/396/375/GCA_013396375.1_ASM1339637v1;;;na,1
1754192,Anaeromyces robustus,Neocallimastigaceae,Neocallimastigales,Chytridiomycota,GCA_002104895.1,126,46705,0.269052550660887,84.3,"[""u12"", ""u4atac"", ""u6atac""]",Anaeromyces sp. S4 v1.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/895/GCA_002104895.1_Anaeromyces_sp._S4_v1.0,GCA_002104895.1;PRJNA330692;SAMN05421914;MCFG00000000.1;representative genome;1754192;1754192;Anaeromyces robustus;strain=S4;;latest;Contig;Major;Full;2017/04/20;Anaeromyces sp. S4 v1.0;DOE Joint Genome Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/895/GCA_002104895.1_Anaeromyces_sp._S4_v1.0;;assembly from type material;na,1
227192,Pedionomus torquatus,Pedionomidae,Charadriiformes,Chordata,GCA_013398155.1,269,100994,0.2656449048517227,79.2,"[""u12"", ""u4atac"", ""u6atac""]",ASM1339815v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/155/GCA_013398155.1_ASM1339815v1,GCA_013398155.1;PRJNA545868;SAMN12253960;VZRU00000000.1;representative genome;227192;227192;Pedionomus torquatus;;B10K-DU-029-80;latest;Scaffold;Major;Full;2020/07/10;ASM1339815v1;B10K Consortium;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/398/155/GCA_013398155.1_ASM1339815v1;;;na,1
2767002,Neocallimastix sp. jgi-2020a,Neocallimastigaceae,Neocallimastigales,Chytridiomycota,GCA_016946835.1,192,98056,0.1954238254213826,89.8,"[""u12"", ""u4atac"", ""u6atac""]",ASM1694683v1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/946/835/GCA_016946835.1_ASM1694683v1,GCA_016946835.1;PRJNA658393;SAMN15902602;JACVTC000000000.1;representative genome;2767002;2767002;Neocallimastix sp. JGI-2020a;strain=sp3;;latest;Contig;Major;Full;2021/02/24;ASM1694683v1;DOE Joint Genome Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/946/835/GCA_016946835.1_ASM1694683v1;;;na,1
197043,Homalodisca vitripennis,Cicadellidae,Hemiptera,Arthropoda,GCF_021130785.1,214,120126,0.1778294831311284,89.8,"[""u12"", ""u4atac"", ""u6atac""]",UT_GWSS_2.1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/130/785/GCF_021130785.1_UT_GWSS_2.1,GCF_021130785.1;PRJNA801498;SAMN22783162;JAJKGG000000000.2;representative genome;197043;197043;Homalodisca vitripennis;;AUS2020;latest;Chromosome;Major;Full;2022/01/26;UT_GWSS_2.1;University of Texas at Austin;GCA_021130785.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/130/785/GCF_021130785.1_UT_GWSS_2.1;;;na,1
742174,Melanaphis sacchari,Aphididae,Hemiptera,Arthropoda,GCF_002803265.2,136,82634,0.1643107406064999,98.8,"[""u12"", ""u4atac"", ""u6atac""]",SCAv2.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/803/265/GCF_002803265.2_SCAv2.0,GCF_002803265.2;PRJNA421017;SAMN07757676;PDEX00000000.2;representative genome;742174;742174;Melanaphis sacchari;strain=LSU;;latest;Scaffold;Major;Full;2018/06/22;SCAv2.0;USDA-ARS Center for Grain and Animal Health Research;GCA_002803265.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/803/265/GCF_002803265.2_SCAv2.0;;;na,1
2340872,Endogone sp. flas-f59071,Endogonaceae,Endogonales,Mucoromycota,GCA_003990785.1,43,34757,0.1235632183908045,63.1,"[""u12"", ""u4atac"", ""u6atac""]",Endsp1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/990/785/GCA_003990785.1_Endsp1,GCA_003990785.1;PRJNA331665;SAMN05444560;RBNK00000000.1;representative genome;2340872;2340872;Endogone sp. FLAS-F59071;strain=FLAS-F59071;;latest;Contig;Major;Full;2019/01/02;Endsp1;DOE Joint Genome Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/990/785/GCA_003990785.1_Endsp1;;;na,1
6185,Schistosoma haematobium,Schistosomatidae,Strigeidida,Platyhelminthes,GCF_000699445.2,59,62370,0.0945073603613705,76.1,"[""u12"", ""u4atac"", ""u6atac""]",SchHae_2.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/699/445/GCF_000699445.2_SchHae_2.0,GCF_000699445.2;PRJNA273970;SAMN11431408;AMPZ00000000.2;representative genome;6185;6185;Schistosoma haematobium;;;latest;Scaffold;Major;Full;2020/01/28;SchHae_2.0;The University of Melbourne;GCA_000699445.2;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/699/445/GCF_000699445.2_SchHae_2.0;;;na,1
35570,Stomoxys calcitrans,Muscidae,Diptera,Arthropoda,GCF_001015335.1,20,53063,0.0376768456944784,98.4,"[""u12"", ""u4atac"", ""u6atac""]",Stomoxys_calcitrans-1.0.1,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/015/335/GCF_001015335.1_Stomoxys_calcitrans-1.0.1,GCF_001015335.1;PRJNA288986;SAMN03486548;LDNW00000000.1;representative genome;35570;35570;Stomoxys calcitrans;breed=8C7A2A5H3J4;;latest;Scaffold;Major;Full;2015/05/31;Stomoxys_calcitrans-1.0.1;Glossina Genomes Consortium;GCA_001015335.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/015/335/GCF_001015335.1_Stomoxys_calcitrans-1.0.1;;;na,1
114742,Pythium insidiosum,Pythiaceae,Pythiales,Oomycota,GCA_001029375.1,4,30975,0.012911972626618,87.1,"[""u12"", ""u4atac"", ""u6atac""]",Pythium_insidiosum_1.0,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/375/GCA_001029375.1_Pythium_insidiosum_1.0,GCA_001029375.1;PRJDB3817;SAMD00028776;BBXB00000000.1;representative genome;114742;114742;Pythium insidiosum;strain=Pi-s;;latest;Scaffold;Major;Full;2015/05/08;Pythium_insidiosum_1.0;King Mongkut's University of Technology Thonburi;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/375/GCA_001029375.1_Pythium_insidiosum_1.0;;;na,1
104778,Seison nebaliae,Seisonidae,Seisonacea,Rotifera,GCA_023231475.1,3,38785,0.0077343508301536,75.7,"[""u12"", ""u4atac"", ""u6atac""]",GA2.2,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/231/475/GCA_023231475.1_GA2.2,"GCA_023231475.1;PRJEB43415;SAMN27400648;JALJEE000000000.1;representative genome;104778;104778;Seison nebaliae;;594-2016;latest;Contig;Major;Full;2022/05/03;GA2.2;Institute of Organismic and Molecular Evolution (iomE), Johannes Gutenberg University Mainz;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/231/475/GCA_023231475.1_GA2.2;;;na",1
39272,Allacma fusca,Sminthuridae,Symphypleona,Arthropoda,GCA_910591605.1,5,152197,0.0032851079486471,90.2,"[""u12"", ""u4atac"", ""u6atac""]",Afus1_asm01,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/910/591/605/GCA_910591605.1_Afus1_asm01,GCA_910591605.1;PRJEB44694;SAMEA8803696;CAJVCH000000000.1;representative genome;39272;39272;Allacma fusca;;;latest;Scaffold;Major;Full;2021/08/13;Afus1_asm01;THE UNIVERSITY OF EDINBURGH;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/910/591/605/GCA_910591605.1_Afus1_asm01;;;na,1